Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphonate metabolism protein/1,5-bisphosphokinase (prpp-forming) phnn | DC415_07395 | Not Available | Positive | 1579088 - 1579633 | 19451.1 |
| lysr family transcriptional regulator | DC415_07400 | Not Available | Negative | 1579643 - 1580524 | 32766.4 |
| antibiotic biosynthesis monooxygenase | DC415_07405 | Not Available | Negative | 1580521 - 1580832 | 11927.6 |
| methylmalonate-semialdehyde dehydrogenase (coa acylating) | DC415_07410 | Not Available | Positive | 1580987 - 1582483 | 53276.2 |
| hypothetical protein | DC415_07415 | Not Available | Negative | 1582711 - 1583277 | 20286.3 |
| urocanate hydratase | DC415_07420 | Not Available | Negative | 1583281 - 1584966 | 61345.9 |
| n-formylglutamate deformylase | DC415_07425 | Not Available | Negative | 1584979 - 1585779 | 29436.7 |
| histidine ammonia-lyase | DC415_07430 | Not Available | Negative | 1585781 - 1587316 | 53101.5 |
| imidazolonepropionase | DC415_07435 | Not Available | Negative | 1587320 - 1588564 | 44410.3 |
| formimidoylglutamate deiminase | DC415_07440 | Not Available | Positive | 1588650 - 1589993 | 48304.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


