Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | DC415_07295 | Not Available | Positive | 1561057 - 1561830 | 27802.2 |
| sulfonate abc transporter atp-binding protein | DC415_07300 | Not Available | Positive | 1561830 - 1562615 | 28847.0 |
| histidine utilization repressor | DC415_07305 | Not Available | Positive | 1562768 - 1563502 | 27535.0 |
| tonb-system energizer exbb | DC415_07310 | Not Available | Positive | 1563856 - 1564848 | 34120.9 |
| tonb system transport protein exbd | DC415_07315 | Not Available | Positive | 1564852 - 1565355 | 17558.9 |
| energy transducer tonb | DC415_07320 | Not Available | Positive | 1565352 - 1566287 | 33277.1 |
| phosphonate metabolism transcriptional regulator phnf | DC415_07325 | Not Available | Negative | 1566323 - 1567042 | 25974.0 |
| phosphonate c-p lyase system protein phng | DC415_07330 | Not Available | Positive | 1567141 - 1567599 | 16485.8 |
| phosphonate c-p lyase system protein phnh | DC415_07335 | Not Available | Positive | 1567599 - 1568204 | 21554.8 |
| carbon-phosphorus lyase complex subunit phni | DC415_07340 | Not Available | Positive | 1568208 - 1569317 | 40991.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


