Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-met | Not Available | Not Available | Positive | 1550954 - 1551030 | Not Available |
| formaldehyde dehydrogenase, glutathione-independent | DC415_07250 | Not Available | Positive | 1551714 - 1552910 | 42157.9 |
| iron abc transporter substrate-binding protein | DC415_07255 | Not Available | Negative | 1553002 - 1554042 | 37988.1 |
| rrf2 family transcriptional regulator | DC415_07260 | Not Available | Positive | 1554328 - 1554804 | 17226.0 |
| ammonia monooxygenase | DC415_07265 | Not Available | Positive | 1554940 - 1555974 | 36112.6 |
| abc transporter substrate-binding protein | DC415_07270 | Not Available | Positive | 1556143 - 1557054 | 32227.5 |
| abc transporter permease | DC415_07275 | Not Available | Positive | 1557082 - 1558260 | 40977.9 |
| amino acid abc transporter atp-binding protein | DC415_07280 | Not Available | Positive | 1558257 - 1559195 | 33992.4 |
| abc transporter | DC415_07285 | Not Available | Positive | 1559192 - 1559947 | 26094.8 |
| abc transporter permease | DC415_07290 | Not Available | Positive | 1560046 - 1560987 | 33425.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


