Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | DC415_00420 | Not Available | Negative | 85839 - 86168 | 12139.9 |
| ketosteroid isomerase | DC415_00425 | Not Available | Positive | 86401 - 86832 | 15365.3 |
| ggdef domain-containing protein | DC415_00430 | Not Available | Positive | 87046 - 87864 | 30014.5 |
| histidine kinase | DC415_00435 | Not Available | Positive | 88256 - 89281 | 37149.1 |
| hypothetical protein | DC415_00440 | Not Available | Positive | 89478 - 89759 | 11014.2 |
| antibiotic biosynthesis monooxygenase | DC415_00445 | Not Available | Negative | 89817 - 90119 | 11125.4 |
| nadph:quinone reductase | DC415_00450 | Not Available | Negative | 90192 - 91208 | 35803.1 |
| lysr family transcriptional regulator | DC415_00455 | Not Available | Positive | 91299 - 92201 | 32567.4 |
| oxidoreductase | DC415_00460 | Not Available | Negative | 92255 - 93121 | 30943.0 |
| lysr family transcriptional regulator | DC415_00465 | Not Available | Positive | 93244 - 94173 | 34097.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


