Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl transferase | DC415_07180 | Not Available | Positive | 1540290 - 1541531 | 45714.0 |
| glycosyl transferase | DC415_07185 | Not Available | Positive | 1541795 - 1542907 | 40618.5 |
| hypothetical protein | DC415_07190 | Not Available | Positive | 1543066 - 1543335 | 10221.1 |
| ceramide glucosyltransferase | DC415_07195 | Not Available | Negative | 1543526 - 1544665 | 41267.5 |
| hypothetical protein | DC415_07200 | Not Available | Negative | 1544937 - 1545398 | 16559.2 |
| hypothetical protein | DC415_07205 | Not Available | Negative | 1545472 - 1545885 | 14790.5 |
| nad(p)-dependent oxidoreductase | DC415_07210 | Not Available | Negative | 1545909 - 1546700 | 27798.2 |
| ribonuclease hi | DC415_07215 | Not Available | Negative | 1546912 - 1547415 | 18630.0 |
| hypothetical protein | DC415_07225 | Not Available | Negative | 1547808 - 1548095 | 10309.7 |
| tail-specific protease | DC415_07230 | Not Available | Positive | 1548412 - 1549960 | 56793.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


