Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cryptochrome/photolyase family protein | DC415_07130 | Not Available | Positive | 1528021 - 1529571 | 59512.8 |
| c factor | DC415_07135 | Not Available | Positive | 1529587 - 1530276 | 24177.8 |
| hypothetical protein | DC415_07140 | Not Available | Positive | 1530470 - 1530721 | 9189.94 |
| glycosyl transferase | DC415_07145 | Not Available | Positive | 1530879 - 1531880 | 37418.6 |
| glycoside hydrolase | DC415_07150 | Not Available | Positive | 1531880 - 1534045 | 79560.3 |
| hypothetical protein | DC415_07155 | Not Available | Negative | 1534226 - 1535314 | 40018.0 |
| sugar transporter | DC415_07160 | Not Available | Negative | 1535311 - 1536600 | 46652.1 |
| lipopolysaccharide biosynthesis protein | DC415_07165 | Not Available | Positive | 1536720 - 1538189 | 53988.9 |
| exopolysaccharide biosynthesis protein | DC415_07170 | Not Available | Positive | 1538189 - 1539538 | 50074.0 |
| polysaccharide deacetylase | DC415_07175 | Not Available | Positive | 1539510 - 1540280 | 28420.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


