Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | DC415_07080 | Not Available | Negative | 1517977 - 1518843 | 31398.4 |
| dipeptide abc transporter permease dppc | DC415_07085 | Not Available | Negative | 1518845 - 1519762 | 33043.3 |
| peptide abc transporter permease | DC415_07090 | Not Available | Negative | 1519778 - 1520782 | 36204.9 |
| abc transporter substrate-binding protein | DC415_07095 | Not Available | Negative | 1520930 - 1522528 | 59247.2 |
| superoxide dismutase | DC415_07100 | Not Available | Negative | 1522838 - 1523530 | 25171.7 |
| sugar phosphate isomerase/epimerase | DC415_07105 | Not Available | Positive | 1523812 - 1524864 | 38961.7 |
| oxidoreductase | DC415_07110 | Not Available | Positive | 1524891 - 1526078 | 42448.2 |
| hypothetical protein | DC415_07115 | Not Available | Negative | 1526140 - 1526337 | 6777.91 |
| porin family protein | DC415_07120 | Not Available | Positive | 1526649 - 1527278 | 21787.5 |
| ba14k family protein | DC415_07125 | Not Available | Negative | 1527343 - 1527657 | 10799.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


