Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 7-cyano-7-deazaguanine synthase quec | DC415_06975 | Not Available | Positive | 1498729 - 1499439 | 25596.1 |
| 6-carboxytetrahydropterin synthase qued | DC415_06980 | Not Available | Positive | 1499439 - 1499807 | 14257.7 |
| 7-carboxy-7-deazaguanine synthase quee | DC415_06985 | Not Available | Positive | 1499804 - 1500553 | 27517.7 |
| hypothetical protein | DC415_06990 | Not Available | Positive | 1500808 - 1500999 | 7106.11 |
| dna-3-methyladenine glycosylase | DC415_06995 | Not Available | Negative | 1501316 - 1501870 | 20067.3 |
| 3-oxoacyl-[acyl-carrier-protein] reductase | DC415_07000 | Not Available | Positive | 1501981 - 1502760 | 27081.1 |
| hypothetical protein | DC415_07005 | Not Available | Positive | 1502965 - 1503969 | 36095.1 |
| hypothetical protein | DC415_07010 | Not Available | Positive | 1504092 - 1504838 | 27484.9 |
| two-component system sensor histidine kinase/response regulator | DC415_07015 | Not Available | Negative | 1504859 - 1505887 | 36985.4 |
| response regulator | DC415_07020 | Not Available | Negative | 1505901 - 1506338 | 16287.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


