Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | DC415_06825 | Not Available | Positive | 1459629 - 1460642 | 35588.7 |
| abc transporter substrate-binding protein | DC415_06830 | Not Available | Positive | 1460776 - 1461723 | 34198.1 |
| amino acid dehydrogenase | DC415_06835 | Not Available | Negative | 1461899 - 1463161 | 45290.5 |
| hypothetical protein | DC415_06840 | Not Available | Negative | 1463294 - 1464871 | 58866.9 |
| nadp-dependent malic enzyme | DC415_06845 | Not Available | Negative | 1465043 - 1467331 | 82529.0 |
| membrane-bound pqq-dependent dehydrogenase, glucose/quinate/shikimate family | DC415_06850 | Not Available | Positive | 1467983 - 1470412 | 85708.3 |
| mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase | DC415_06855 | Not Available | Positive | 1470670 - 1472100 | 53080.9 |
| para family protein | DC415_06860 | Not Available | Negative | 1472136 - 1472828 | 25234.8 |
| chemotaxis response regulator protein-glutamate methylesterase | DC415_06865 | Not Available | Negative | 1472953 - 1474041 | 38639.2 |
| chemotaxis protein cher | DC415_06870 | Not Available | Negative | 1474048 - 1474896 | 32012.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


