Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna pseudouridine synthase | DC415_06725 | Not Available | Negative | 1435374 - 1436042 | 24744.6 |
| thymidylate synthase | DC415_06730 | Not Available | Negative | 1436095 - 1436682 | 20914.8 |
| aminoacetone oxidase family fad-binding enzyme | DC415_06735 | Not Available | Positive | 1436863 - 1438074 | 43538.4 |
| hybrid sensor histidine kinase/response regulator | DC415_06740 | Not Available | Positive | 1438215 - 1441166 | 108365.0 |
| glyoxylate/hydroxypyruvate reductase a | DC415_06745 | Not Available | Negative | 1441233 - 1442177 | 34631.5 |
| chain-length determining protein | DC415_06750 | Not Available | Negative | 1442304 - 1444652 | 85469.9 |
| glycosyl transferase | DC415_06755 | Not Available | Negative | 1444724 - 1445716 | 36652.2 |
| glycosyl transferase family a | DC415_06760 | Not Available | Negative | 1445713 - 1446582 | 31696.9 |
| succinoglycan biosynthesis protein exoa | DC415_06765 | Not Available | Negative | 1446642 - 1447658 | 37286.2 |
| glycosyl transferase family 1 | DC415_06770 | Not Available | Negative | 1447655 - 1448854 | 44118.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


