Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | DC415_06625 | Not Available | Positive | 1414938 - 1416143 | 44180.8 |
| sugar abc transporter permease | DC415_06630 | Not Available | Positive | 1416252 - 1417169 | 33943.8 |
| carbohydrate abc transporter permease | DC415_06635 | Not Available | Positive | 1417159 - 1417989 | 30595.3 |
| glycerol-3-phosphate abc transporter atp-binding protein | DC415_06640 | Not Available | Positive | 1417986 - 1419062 | 38752.0 |
| tigr02588 family protein | DC415_06645 | Not Available | Negative | 1419066 - 1419476 | 14815.0 |
| tigr02587 family membrane protein | DC415_06650 | Not Available | Negative | 1419484 - 1420332 | 30615.9 |
| septum formation inhibitor minc | DC415_06655 | Not Available | Positive | 1420551 - 1421273 | 25574.1 |
| septum site-determining protein mind | DC415_06660 | Not Available | Positive | 1421304 - 1422116 | 29170.5 |
| cell division topological specificity factor mine | DC415_06665 | Not Available | Positive | 1422113 - 1422373 | 9686.81 |
| gntr family transcriptional regulator | DC415_06670 | Not Available | Positive | 1422488 - 1423207 | 27066.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


