Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-formylglutamate amidohydrolase | DC415_06525 | Not Available | Negative | 1395681 - 1396499 | 30796.2 |
| response regulator sira | DC415_06530 | Not Available | Negative | 1396704 - 1396937 | 8571.58 |
| hypothetical protein | DC415_06535 | Not Available | Negative | 1396934 - 1398238 | 47673.2 |
| cardiolipin synthase | DC415_06540 | Not Available | Positive | 1398364 - 1399824 | 53943.8 |
| endonuclease | DC415_06545 | Not Available | Positive | 1399929 - 1400750 | 29832.1 |
| hypothetical protein | DC415_06550 | Not Available | Negative | 1400747 - 1400992 | 9053.03 |
| duf992 domain-containing protein | DC415_06555 | Not Available | Positive | 1401069 - 1401599 | 17879.4 |
| cytochrome c family protein | DC415_06560 | Not Available | Positive | 1401701 - 1402087 | 13740.6 |
| recombination regulator recx | DC415_06565 | Not Available | Negative | 1402096 - 1402641 | 20625.4 |
| adenylate/guanylate cyclase domain-containing protein | DC415_06570 | Not Available | Negative | 1402643 - 1403890 | 46364.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


