Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| electron transfer flavoprotein subunit beta/fixa family protein | DC415_06275 | Not Available | Positive | 1335030 - 1335776 | 26371.3 |
| electron transfer flavoprotein subunit alpha/fixb family protein | DC415_06280 | Not Available | Positive | 1335800 - 1336729 | 31381.3 |
| 3-hydroxybutyryl-coa dehydrogenase | DC415_06285 | Not Available | Positive | 1336894 - 1337775 | 31629.5 |
| sodium:dicarboxylate symporter | DC415_06290 | Not Available | Negative | 1337776 - 1338444 | 23449.5 |
| argininosuccinate lyase | DC415_06295 | Not Available | Positive | 1338467 - 1339867 | 50687.4 |
| hypothetical protein | DC415_06300 | Not Available | Positive | 1339975 - 1340169 | 6875.43 |
| diaminopimelate decarboxylase | DC415_06305 | Not Available | Positive | 1340182 - 1341450 | 45602.7 |
| tigr02302 family protein | DC415_06310 | Not Available | Positive | 1341626 - 1344313 | 99300.0 |
| glutathione-dependent formaldehyde dehydrogenase | DC415_06315 | Not Available | Positive | 1344476 - 1345645 | 42087.7 |
| transcriptional regulator | DC415_06320 | Not Available | Negative | 1345799 - 1346815 | 37236.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


