Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DC415_00270 | Not Available | Negative | 55896 - 56399 | 17815.4 |
| restriction endonuclease | DC415_00275 | Not Available | Positive | 56903 - 57247 | 12877.3 |
| hypothetical protein | DC415_00280 | Not Available | Negative | 57367 - 57789 | 15467.5 |
| transcriptional regulator | DC415_00285 | Not Available | Negative | 57961 - 58353 | 14573.6 |
| oxidoreductase | DC415_00290 | Not Available | Positive | 58536 - 59267 | 24888.9 |
| na+/h+ antiporter nhaa | DC415_00295 | Not Available | Negative | 59365 - 60609 | 43797.6 |
| sodium transporter | DC415_00300 | Not Available | Negative | 60757 - 61701 | 33193.0 |
| gnat family n-acetyltransferase | DC415_00305 | Not Available | Negative | 61897 - 62334 | 15883.8 |
| delayed-early response protein/equilibrative nucleoside transporter | DC415_00310 | Not Available | Negative | 62875 - 64023 | 39297.0 |
| duf1007 domain-containing protein | DC415_00315 | Not Available | Negative | 64293 - 64940 | 23976.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


