Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transporter | DC415_05620 | Not Available | Negative | 1202724 - 1203161 | 15675.7 |
| c4-dicarboxylate transporter dcta | DC415_05625 | Not Available | Negative | 1203283 - 1204617 | 46809.6 |
| sensor histidine kinase | DC415_05630 | Not Available | Positive | 1204926 - 1206695 | 64916.2 |
| fis family transcriptional regulator | DC415_05635 | Not Available | Positive | 1206697 - 1208052 | 50140.3 |
| ba14k family protein | DC415_05640 | Not Available | Negative | 1208098 - 1208580 | 18028.0 |
| asp/glu/hydantoin racemase | DC415_05645 | Not Available | Negative | 1208692 - 1209438 | 25937.5 |
| abc transporter permease | DC415_05650 | Not Available | Negative | 1209449 - 1210267 | 29653.7 |
| abc transporter permease | DC415_05655 | Not Available | Negative | 1210271 - 1211182 | 33748.5 |
| abc transporter substrate-binding protein | DC415_05660 | Not Available | Negative | 1211375 - 1212664 | 47105.6 |
| fe3+/spermidine/putrescine abc transporter atp-binding protein | DC415_05665 | Not Available | Negative | 1212695 - 1213774 | 38505.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


