Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DC415_05570 | Not Available | Negative | 1190497 - 1190715 | 8441.04 |
| hypothetical protein | DC415_05575 | Not Available | Positive | 1190875 - 1191258 | 13712.4 |
| inositol 2-dehydrogenase | DC415_05580 | Not Available | Positive | 1191514 - 1192506 | 35380.0 |
| 5-deoxy-glucuronate isomerase | DC415_05585 | Not Available | Negative | 1192581 - 1193390 | 29947.1 |
| myo-inosose-2 dehydratase | DC415_05590 | Not Available | Negative | 1193407 - 1194306 | 32845.1 |
| 3d-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) | DC415_05595 | Not Available | Negative | 1194309 - 1196132 | 65563.0 |
| 5-dehydro-2-deoxygluconokinase | DC415_05600 | Not Available | Negative | 1196129 - 1198051 | 70208.4 |
| rpir family transcriptional regulator | DC415_05605 | Not Available | Negative | 1198170 - 1198985 | 29530.5 |
| acetyl/propionyl-coa carboxylase subunit alpha | DC415_05610 | Not Available | Negative | 1199085 - 1201088 | 72633.0 |
| methylmalonyl-coa carboxyltransferase | DC415_05615 | Not Available | Negative | 1201100 - 1202632 | 55857.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


