Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| card family transcriptional regulator | DC415_05520 | Not Available | Negative | 1181657 - 1182442 | 28850.3 |
| cyclic nucleotide-binding protein | DC415_05525 | Not Available | Positive | 1182601 - 1183329 | 26275.0 |
| hypothetical protein | DC415_05530 | Not Available | Positive | 1183535 - 1184137 | 19194.9 |
| crp/fnr family transcriptional regulator | DC415_05535 | Not Available | Negative | 1184191 - 1184958 | 28390.2 |
| hypothetical protein | DC415_05540 | Not Available | Negative | 1185087 - 1185419 | 11690.7 |
| cytochrome c oxidase subunit i | DC415_05545 | Not Available | Negative | 1185419 - 1187914 | 91322.9 |
| cytochrome c oxidase subunit ii | DC415_05550 | Not Available | Negative | 1187911 - 1188564 | 23242.2 |
| duf2231 domain-containing protein | DC415_05555 | Not Available | Positive | 1188742 - 1189143 | 14010.3 |
| hypothetical protein | DC415_05560 | Not Available | Negative | 1189121 - 1189615 | 18076.9 |
| caax protease | DC415_05565 | Not Available | Negative | 1189609 - 1190376 | 28036.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


