Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | DC415_05470 | Not Available | Positive | 1174646 - 1175662 | 36328.6 |
| abc transporter permease | DC415_05475 | Not Available | Positive | 1175698 - 1176717 | 34847.5 |
| histidinol phosphatase | DC415_05480 | Not Available | Positive | 1176714 - 1177475 | 27922.9 |
| eama/rhat family transporter | DC415_05485 | Not Available | Positive | 1177390 - 1178427 | 37352.3 |
| rna polymerase subunit sigma | DC415_05490 | Not Available | Positive | 1178728 - 1179246 | 19362.4 |
| cysteine hydrolase | DC415_05495 | Not Available | Negative | 1179292 - 1179906 | 23511.1 |
| hypothetical protein | DC415_05500 | Not Available | Negative | 1179996 - 1180235 | 9321.12 |
| hypothetical protein | DC415_05505 | Not Available | Negative | 1180424 - 1180663 | 8917.73 |
| hypothetical protein | DC415_05510 | Not Available | Negative | 1180779 - 1180982 | 7465.46 |
| duf305 domain-containing protein | DC415_05515 | Not Available | Positive | 1181110 - 1181640 | 18920.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


