Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-glucosidase/alpha-galactosidase | DC415_05420 | Not Available | Positive | 1160869 - 1162323 | 53911.7 |
| alpha-galactoside-binding protein | DC415_05425 | Not Available | Positive | 1162437 - 1164518 | 77489.5 |
| abc transporter permease | DC415_05430 | Not Available | Positive | 1164738 - 1165742 | 36677.9 |
| abc transporter permease | DC415_05435 | Not Available | Positive | 1165745 - 1166866 | 40773.4 |
| microcin abc transporter atp-binding protein | DC415_05440 | Not Available | Positive | 1166885 - 1168540 | 61482.4 |
| alpha-glucosidase/alpha-galactosidase | DC415_05445 | Not Available | Positive | 1168562 - 1169914 | 50977.3 |
| class 1b ribonucleoside-diphosphate reductase subunit beta | DC415_05450 | Not Available | Negative | 1170160 - 1171149 | 37459.1 |
| ribonucleotide-diphosphate reductase subunit alpha | DC415_05455 | Not Available | Negative | 1171166 - 1173322 | 81573.9 |
| class ib ribonucleoside-diphosphate reductase assembly flavoprotein nrdi | DC415_05460 | Not Available | Negative | 1173310 - 1173708 | 14495.3 |
| nrdh-redoxin | DC415_05465 | Not Available | Negative | 1173717 - 1173941 | 8226.84 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


