Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii subunit beta | DC415_05315 | Not Available | Negative | 1142873 - 1143991 | 40356.3 |
| 16s rrna (cytidine(1402)-2'-o)-methyltransferase | DC415_05320 | Not Available | Positive | 1144251 - 1145180 | 33546.1 |
| yran family protein | DC415_05325 | Not Available | Positive | 1145170 - 1145538 | 14120.3 |
| maltose acetyltransferase | DC415_05330 | Not Available | Positive | 1145549 - 1146103 | 19159.0 |
| abc transporter substrate-binding protein | DC415_05335 | Not Available | Positive | 1146245 - 1147543 | 47266.2 |
| glycerol-3-phosphate transporter permease | DC415_05340 | Not Available | Positive | 1147743 - 1148714 | 35797.3 |
| sn-glycerol-3-phosphate abc transporter permease ugpe | DC415_05345 | Not Available | Positive | 1148726 - 1149568 | 31265.3 |
| sn-glycerol-3-phosphate abc transporter atp-binding protein ugpc | DC415_05350 | Not Available | Positive | 1149581 - 1150684 | 40185.5 |
| dna-binding protein | DC415_05355 | Not Available | Positive | 1150772 - 1151353 | 21097.3 |
| gnat family n-acetyltransferase | DC415_05360 | Not Available | Positive | 1151365 - 1151892 | 18911.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


