Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mbl fold metallo-hydrolase | DC415_05165 | Not Available | Negative | 1111200 - 1111970 | 28416.4 |
| alcohol dehydrogenase | DC415_05170 | Not Available | Negative | 1112036 - 1113196 | 40444.0 |
| succinate-semialdehyde dehydrogenase (nadp(+)) | DC415_05175 | Not Available | Negative | 1113217 - 1114671 | 51622.9 |
| iclr family transcriptional regulator | DC415_05180 | Not Available | Positive | 1114761 - 1115537 | 27797.4 |
| pyridoxamine 5'-phosphate oxidase | DC415_05185 | Not Available | Negative | 1115857 - 1116291 | 16029.0 |
| hypothetical protein | DC415_05190 | Not Available | Negative | 1116346 - 1117173 | 28815.5 |
| lysr family transcriptional regulator | DC415_05195 | Not Available | Negative | 1117326 - 1118237 | 33284.5 |
| hypothetical protein | DC415_05200 | Not Available | Positive | 1118334 - 1118663 | 12191.6 |
| short-chain dehydrogenase | DC415_05205 | Not Available | Positive | 1118660 - 1119448 | 27201.8 |
| gmp synthase (glutamine-hydrolyzing) | DC415_05210 | Not Available | Negative | 1119659 - 1121236 | 57404.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


