Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | DC415_05115 | Not Available | Positive | 1099375 - 1100349 | 36242.3 |
| trap transporter permease dctq | DC415_05120 | Not Available | Positive | 1100462 - 1101037 | 22353.2 |
| abc transporter permease | DC415_05125 | Not Available | Positive | 1101039 - 1102445 | 50183.2 |
| l-idonate 5-dehydrogenase | DC415_05130 | Not Available | Positive | 1102519 - 1103568 | 36648.1 |
| mannonate dehydratase | DC415_05135 | Not Available | Positive | 1103587 - 1104783 | 44673.0 |
| mannitol dehydrogenase family protein | DC415_05140 | Not Available | Positive | 1104786 - 1106192 | 50879.1 |
| mfs transporter | DC415_05145 | Not Available | Negative | 1106264 - 1108150 | 67152.5 |
| aminopeptidase | DC415_05150 | Not Available | Negative | 1108531 - 1109769 | 44500.6 |
| cys-trna(pro) deacylase | DC415_05155 | Not Available | Negative | 1109855 - 1110331 | 16727.3 |
| arsc family reductase | DC415_05160 | Not Available | Negative | 1110337 - 1110687 | 12964.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


