Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-oxoprolinase | DC415_04915 | Not Available | Negative | 1049354 - 1050976 | 56997.1 |
| 5-oxoprolinase | DC415_04920 | Not Available | Negative | 1050973 - 1053066 | 74085.1 |
| tetr/acrr family transcriptional regulator | DC415_04925 | Not Available | Positive | 1053229 - 1053903 | 25048.0 |
| iclr family transcriptional regulator | DC415_04930 | Not Available | Negative | 1053876 - 1054640 | 27252.7 |
| methylhydantoinase | DC415_04935 | Not Available | Negative | 1054808 - 1056457 | 58798.1 |
| methylhydantoinase | DC415_04940 | Not Available | Negative | 1056457 - 1058508 | 73371.0 |
| agropinic acid transporter substrate-binding protein | DC415_04945 | Not Available | Positive | 1058980 - 1060509 | 55272.9 |
| glutathione abc transporter permease gsic | DC415_04950 | Not Available | Positive | 1060636 - 1061583 | 33767.4 |
| abc transporter permease | DC415_04955 | Not Available | Positive | 1061580 - 1062416 | 29339.4 |
| glutathione abc transporter atp-binding protein gsia | DC415_04960 | Not Available | Positive | 1062430 - 1064253 | 66314.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


