Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein glxc | DC415_04865 | Not Available | Negative | 1038606 - 1039292 | 23737.2 |
| glutamine amidotransferase | DC415_04870 | Not Available | Negative | 1039329 - 1040234 | 31877.9 |
| merr family transcriptional regulator | DC415_04875 | Not Available | Negative | 1040331 - 1040957 | 22915.3 |
| glxa family transcriptional regulator | DC415_04880 | Not Available | Negative | 1041047 - 1042021 | 35251.3 |
| sarcosine oxidase subunit beta | DC415_04885 | Not Available | Positive | 1042111 - 1043361 | 45113.9 |
| sarcosine oxidase subunit delta | DC415_04890 | Not Available | Positive | 1043386 - 1043661 | 10321.0 |
| sarcosine oxidase subunit alpha | DC415_04895 | Not Available | Positive | 1043658 - 1046621 | 105904.0 |
| sarcosine oxidase subunit gamma | DC415_04900 | Not Available | Positive | 1046614 - 1047162 | 19767.1 |
| d-amino-acid oxidase | DC415_04905 | Not Available | Negative | 1047256 - 1048581 | 47862.8 |
| short-chain dehydrogenase | DC415_04910 | Not Available | Negative | 1048607 - 1049305 | 24776.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


