Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xylose isomerase | DC415_00170 | Not Available | Positive | 33276 - 34586 | 49325.3 |
| arac family transcriptional regulator | DC415_00175 | Not Available | Negative | 34842 - 35852 | 37166.7 |
| alpha/beta hydrolase | DC415_00180 | Not Available | Positive | 35971 - 36963 | 35636.0 |
| qace family quaternary ammonium compound efflux smr transporter | DC415_00185 | Not Available | Positive | 37106 - 37438 | 11529.6 |
| nad(p)h-dependent oxidoreductase | DC415_00190 | Not Available | Positive | 37581 - 38213 | 24070.8 |
| methionine abc transporter atp-binding protein | DC415_00195 | Not Available | Positive | 38542 - 39582 | 36607.4 |
| abc transporter permease | DC415_00200 | Not Available | Positive | 39572 - 40240 | 23176.4 |
| metq/nlpa family abc transporter substrate-binding protein | DC415_00205 | Not Available | Positive | 40297 - 41073 | 27727.1 |
| bifunctional diguanylate cyclase/phosphodiesterase | DC415_00210 | Not Available | Positive | 41309 - 43477 | 78337.5 |
| hypothetical protein | DC415_00215 | Not Available | Negative | 43490 - 44476 | 36811.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


