Agrobacterium tumefaciens strain TPD7005

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Agrobacterium

Description

Agrobacterium tumefaciens strain TPD7005 is a Gram-negative, rod-shaped bacterium that thrives in aerobic environments and has an optimal growth temperature of 25.0°C. This strain, like other members of the Agrobacterium genus, is known for its remarkable ability to interact with plant systems, although specific interactions or ecological roles of strain TPD7005 have not been detailed in the current data. The habitat of A. tumefaciens strain TPD7005 is described as multiple, indicating its potential adaptability to various environmental conditions. This flexibility may allow the strain to occupy diverse niches, potentially contributing to its survival and proliferation in different ecosystems. While the strain is recognized primarily for its association with plants, further insights into its ecological role could be derived from studying its interactions with both biotic and abiotic factors in its habitats. Understanding these dynamics may provide valuable information on the broader implications of A. tumefaciens TPD7005 in microbial ecology and its potential applications in biotechnology and agriculture.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusAgrobacterium
SpeciesAgrobacterium tumefaciens
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Agrobacterium tumefaciens strain TPD7005
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature25
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agrobacterium tumefaciens strain TPD7005

Accession NumberQDFL00000000.1

Gene Summary

Adenine Count

1073976 bp

Thymine Count

1086538 bp

Guanine Count

1515935 bp

Cytosine Count

1493195 bp

Genome Length

5169670 bp

Protein-coding Genes

4676 genes

Non-Coding Genes

97 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Dna-cytosine methyltransferaseDC415_13470Not Available-2897694 - 289860233455.7
Hypothetical proteinDC415_13475Not Available-2898577 - 28987717317.8
hypothetical proteinDC415_13480Not Available-2898946 - 289927211813.8
Hypothetical proteinDC415_13485Not Available-2899285 - 290046041442.7
hypothetical proteinDC415_13490Not Available-2900457 - 29006757664.24
Tail proteinDC415_13495Not Available-2900735 - 290173634801.9
Tail proteinDC415_13500Not Available-2901743 - 29019587576.21
Tail proteinDC415_13505Not Available-2901958 - 290243416743.3
Tail tape measure proteinDC415_13510Not Available-2902431 - 290447973943.9
hypothetical proteinDC415_13515Not Available-2904637 - 290515218840.3

Displaying genes 1 – 10 of 4773 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites