Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| murein l,d-transpeptidase | DCP16_04205 | Not Available | Negative | 885458 - 886789 | 49182.6 |
| marr family transcriptional regulator | DCP16_04210 | Not Available | Negative | 887096 - 887608 | 19493.4 |
| hypothetical protein | DCP16_04215 | Not Available | Negative | 887839 - 888276 | 16229.0 |
| porphobilinogen synthase | DCP16_04220 | Not Available | Positive | 888612 - 889625 | 36671.1 |
| rdd family protein | DCP16_04225 | Not Available | Positive | 889690 - 890148 | 16975.4 |
| arginyltransferase | DCP16_04230 | Not Available | Positive | 890285 - 891043 | 28708.3 |
| abrb/maze/spovt family dna-binding domain-containing protein | DCP16_04235 | Not Available | Positive | 891104 - 891325 | 8276.1 |
| type ii toxin-antitoxin system death-on-curing family toxin | DCP16_04240 | Not Available | Positive | 891322 - 891717 | 14402.3 |
| dna topoisomerase iv subunit a | DCP16_04245 | Not Available | Negative | 891763 - 894018 | 83073.5 |
| hypothetical protein | DCP16_04250 | Not Available | Positive | 894244 - 895434 | 41758.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
