Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribokinase | DCP16_04155 | Not Available | Positive | 875361 - 876320 | 33768.1 |
| sodium-translocating pyrophosphatase | DCP16_04160 | Not Available | Negative | 876343 - 878481 | 72406.6 |
| mfs transporter | DCP16_04165 | Not Available | Negative | 878686 - 879906 | 42340.0 |
| transcription antitermination factor nusb | DCP16_04170 | Not Available | Negative | 880004 - 880501 | 18407.1 |
| 6,7-dimethyl-8-ribityllumazine synthase | DCP16_04175 | Not Available | Negative | 880506 - 880952 | 15796.8 |
| amino acid transporter | DCP16_04180 | Not Available | Negative | 881088 - 881723 | 22536.3 |
| riboflavin synthase | DCP16_04185 | Not Available | Negative | 881782 - 882393 | 22120.3 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | DCP16_04190 | Not Available | Negative | 882393 - 883484 | 38691.6 |
| transcriptional repressor nrdr | DCP16_04195 | Not Available | Negative | 883489 - 883968 | 18204.6 |
| serine hydroxymethyltransferase | DCP16_04200 | Not Available | Negative | 883981 - 885270 | 46550.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
