Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf305 domain-containing protein | DC425_18065 | Not Available | Positive | 3844268 - 3844660 | 14357.6 |
| metal-binding protein | DC425_18070 | Not Available | Positive | 3844732 - 3845181 | 15715.3 |
| transporter | DC425_18075 | Not Available | Positive | 3846067 - 3847296 | 43552.7 |
| efflux rnd transporter periplasmic adaptor subunit | DC425_18080 | Not Available | Positive | 3847293 - 3848792 | 51687.3 |
| cusa/czca family heavy metal efflux rnd transporter | DC425_18085 | Not Available | Positive | 3848789 - 3851926 | 112502.0 |
| copper-binding protein | DC425_18090 | Not Available | Positive | 3851926 - 3852252 | 10926.5 |
| glutaredoxin family protein | DC425_18095 | Not Available | Negative | 3852274 - 3853041 | 27974.7 |
| merr family dna-binding transcriptional regulator | DC425_18100 | Not Available | Positive | 3853114 - 3853518 | 14302.9 |
| hypothetical protein | DC425_18105 | Not Available | Negative | 3853559 - 3854011 | 17603.2 |
| is5 family transposase | DC425_18110 | Not Available | Positive | 3854219 - 3854976 | 29036.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
