Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein trab | DC425_17115 | Not Available | Positive | 3663926 - 3665245 | 46586.5 |
| dsbc family protein | DC425_17120 | Not Available | Positive | 3665266 - 3666078 | 28210.0 |
| conjugal transfer protein | DC425_17125 | Not Available | Positive | 3666075 - 3666860 | 25841.5 |
| type-iv secretion system protein trac | DC425_17130 | Not Available | Positive | 3666866 - 3667334 | 17274.9 |
| hypothetical protein | DC425_17135 | Not Available | Negative | 3667499 - 3667693 | 6699.03 |
| helicase | DC425_17140 | Not Available | Negative | 3668071 - 3671109 | 111936.0 |
| hypothetical protein | DC425_17145 | Not Available | Negative | 3671106 - 3672869 | 63409.2 |
| hypothetical protein | DC425_17150 | Not Available | Negative | 3672944 - 3674137 | 44968.3 |
| xre family transcriptional regulator | DC425_17155 | Not Available | Negative | 3674211 - 3674531 | 11396.8 |
| addiction module toxin rele | DC425_17160 | Not Available | Negative | 3674543 - 3674896 | 13454.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
