Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional initiation protein tat | DC425_16705 | Not Available | Positive | 3580041 - 3580751 | 25648.7 |
| duf1810 domain-containing protein | DC425_16710 | Not Available | Negative | 3580758 - 3581189 | 15430.2 |
| hypothetical protein | DC425_16715 | Not Available | Positive | 3581225 - 3581758 | 18778.3 |
| ybhb/ybcl family raf kinase inhibitor-like protein | DC425_16720 | Not Available | Positive | 3581758 - 3582381 | 21326.3 |
| ggdef domain-containing protein | DC425_16725 | Not Available | Negative | 3582786 - 3583838 | 37955.8 |
| peroxiredoxin | DC425_16730 | Not Available | Negative | 3583903 - 3584433 | 18058.0 |
| histidinol phosphate phosphatase | DC425_16735 | Not Available | Positive | 3584505 - 3585332 | 28945.0 |
| asma family protein | DC425_16740 | Not Available | Negative | 3585818 - 3587935 | 75615.8 |
| 50s ribosomal protein l35 | DC425_16745 | Not Available | Positive | 3588107 - 3588310 | 7458.33 |
| 50s ribosomal protein l20 | DC425_16750 | Not Available | Positive | 3588323 - 3588688 | 13551.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
