Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fucose-binding protein | DCP16_03750 | Not Available | Negative | 785646 - 786098 | 16336.8 |
| plp-dependent aminotransferase family protein | DCP16_03755 | Not Available | Positive | 786339 - 787583 | 45217.0 |
| phenazine biosynthesis protein phzf | DCP16_03760 | Not Available | Positive | 787749 - 788582 | 29431.1 |
| fe(3+) abc transporter substrate-binding protein | DCP16_03765 | Not Available | Positive | 788672 - 789658 | 34692.7 |
| abc transporter permease | DCP16_03770 | Not Available | Positive | 789668 - 791362 | 59848.3 |
| abc transporter atp-binding protein | DCP16_03775 | Not Available | Positive | 791350 - 792378 | 37275.4 |
| endonuclease | DCP16_03780 | Not Available | Positive | 792440 - 793549 | 42189.3 |
| duf4269 domain-containing protein | DCP16_03785 | Not Available | Negative | 793599 - 794150 | 20675.8 |
| hypothetical protein | DCP16_03790 | Not Available | Negative | 794256 - 794489 | 8663.25 |
| Trna-thr | Not Available | Not Available | Positive | 794716 - 794791 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
