Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamine cyclotransferase | DC425_16555 | Not Available | Negative | 3546112 - 3547017 | 31594.9 |
| cold-shock protein | DC425_16560 | Not Available | Negative | 3547359 - 3548177 | 27151.5 |
| ribonuclease d | DC425_16565 | Not Available | Positive | 3548469 - 3549089 | 23056.3 |
| lps export abc transporter periplasmic protein lptc | DC425_16570 | Not Available | Positive | 3549094 - 3549741 | 23205.8 |
| osta family protein | DC425_16575 | Not Available | Positive | 3549748 - 3550299 | 18840.6 |
| lps export abc transporter atp-binding protein | DC425_16580 | Not Available | Positive | 3550572 - 3551348 | 28180.1 |
| rna polymerase sigma-54 factor | DC425_16585 | Not Available | Positive | 3551460 - 3552938 | 53046.1 |
| hypothetical protein | DC425_16590 | Not Available | Negative | 3553067 - 3553876 | 29055.6 |
| dna ligase-associated dexh box helicase | DC425_16595 | Not Available | Negative | 3553961 - 3554959 | 36869.1 |
| dna ligase-associated dexh box helicase | DC425_16600 | Not Available | Positive | 3555174 - 3557561 | 87831.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
