Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| agmatine deiminase | DC425_16355 | Not Available | Negative | 3505278 - 3506249 | 34845.0 |
| peptidase m28 | DC425_16360 | Not Available | Negative | 3506246 - 3507892 | 58761.2 |
| 30s ribosomal protein s4 | DC425_16365 | Not Available | Negative | 3508145 - 3508759 | 23215.1 |
| hypothetical protein | DC425_16370 | Not Available | Negative | 3508968 - 3509204 | 8288.86 |
| chorismate mutase | DC425_16375 | Not Available | Positive | 3509309 - 3509638 | 11705.9 |
| rrna methyltransferase | DC425_16380 | Not Available | Negative | 3510147 - 3510881 | 26343.7 |
| transcriptional regulator nrdr | DC425_16385 | Not Available | Negative | 3510878 - 3511354 | 17942.3 |
| serine hydroxymethyltransferase | DC425_16390 | Not Available | Negative | 3511553 - 3512863 | 46132.1 |
| ribose 5-phosphate isomerase b | DC425_16395 | Not Available | Negative | 3512868 - 3513302 | 14978.9 |
| duf3429 domain-containing protein | DC425_16400 | Not Available | Positive | 3513511 - 3514032 | 17203.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
