Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009
Accession NumberQDFK00000000.1
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DCP16_00065 | Not Available | - | 8929 - 9972 | 37697.2 |
| transaldolase | DCP16_00070 | Not Available | + | 10197 - 11156 | 34372.1 |
| iclr family transcriptional regulator | DCP16_00075 | Not Available | - | 11455 - 12219 | 28161.8 |
| sdr family nad(p)-dependent oxidoreductase | DCP16_00080 | Not Available | + | 12333 - 13064 | 25545.4 |
| duf1328 domain-containing protein | DCP16_00085 | Not Available | - | 13255 - 13428 | 6032.92 |
| hypothetical protein | DCP16_00090 | Not Available | - | 13630 - 14478 | 30089.5 |
| hypothetical protein | DCP16_00095 | Not Available | - | 14475 - 15335 | 30384.0 |
| manganese/iron abc transporter atp-binding protein | DCP16_00100 | Not Available | - | 15332 - 16243 | 32983.7 |
| iron abc transporter substrate-binding protein | DCP16_00105 | Not Available | - | 16246 - 17136 | 32063.2 |
| lysine--trna ligase | DCP16_00115 | Not Available | - | 19081 - 20583 | 56703.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.