Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DC425_15435 | Not Available | Negative | 3336957 - 3337382 | 15644.5 |
| type iv secretory system conjugative dna transfer family protein | DC425_15445 | Not Available | Negative | 3337901 - 3339814 | 69449.8 |
| p-type dna transfer atpase virb11 | DC425_15450 | Not Available | Negative | 3339827 - 3340849 | 37361.9 |
| type vi secretion protein | DC425_15455 | Not Available | Negative | 3340851 - 3342161 | 44744.7 |
| conjugal transfer protein | DC425_15460 | Not Available | Negative | 3342163 - 3343170 | 36752.9 |
| conjugal transfer protein traj | DC425_15465 | Not Available | Negative | 3343172 - 3343849 | 25337.1 |
| conjugal transfer protein trah | DC425_15470 | Not Available | Negative | 3344290 - 3345324 | 35742.0 |
| hypothetical protein | DC425_15475 | Not Available | Negative | 3345385 - 3345654 | 9863.89 |
| type vi secretion protein | DC425_15480 | Not Available | Negative | 3345656 - 3346381 | 25341.2 |
| virb4 family type iv secretion/conjugal transfer atpase | DC425_15485 | Not Available | Negative | 3346383 - 3348749 | 88558.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
