Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf448 domain-containing protein | DC425_14230 | Not Available | Positive | 3091552 - 3092274 | 25742.7 |
| translation initiation factor if-2 | DC425_14235 | Not Available | Positive | 3092271 - 3095120 | 100585.0 |
| 30s ribosome-binding factor rbfa | DC425_14240 | Not Available | Positive | 3095230 - 3095616 | 14723.7 |
| thymidine kinase | DC425_14250 | Not Available | Positive | 3096510 - 3097088 | 20744.0 |
| site-2 protease family protein | DC425_14255 | Not Available | Positive | 3097220 - 3097909 | 24432.0 |
| trna pseudouridine(55) synthase trub | DC425_14260 | Not Available | Positive | 3097909 - 3098871 | 33878.5 |
| 30s ribosomal protein s15 | DC425_14265 | Not Available | Positive | 3098888 - 3099157 | 10324.6 |
| polyribonucleotide nucleotidyltransferase | DC425_14270 | Not Available | Positive | 3099384 - 3101765 | 85526.9 |
| hypothetical protein | DC425_14275 | Not Available | Positive | 3101984 - 3102166 | 6885.98 |
| hypothetical protein | DC425_14280 | Not Available | Positive | 3102262 - 3102837 | 20377.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
