Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxy-tetrahydrodipicolinate reductase | DC425_14080 | Not Available | Negative | 3062840 - 3063568 | 24554.3 |
| methyl-accepting chemotaxis protein | DC425_14085 | Not Available | Negative | 3063768 - 3065117 | 47034.8 |
| hypothetical protein | DC425_14090 | Not Available | Positive | 3065259 - 3065450 | 6866.64 |
| nad-dependent protein deacylase | DC425_14095 | Not Available | Positive | 3065685 - 3066407 | 25476.2 |
| gtpase era | DC425_14100 | Not Available | Negative | 3066537 - 3067436 | 32616.3 |
| ribonuclease iii | DC425_14105 | Not Available | Negative | 3067510 - 3068178 | 23969.4 |
| signal peptidase i | DC425_14110 | Not Available | Negative | 3068175 - 3069041 | 32009.4 |
| glucose-6-phosphate isomerase | DC425_14115 | Not Available | Positive | 3069173 - 3070663 | 54081.0 |
| type ii toxin-antitoxin system vapb family antitoxin | DC425_14120 | Not Available | Positive | 3070708 - 3070920 | 8104.63 |
| vapc toxin family pin domain ribonuclease | DC425_14125 | Not Available | Positive | 3070911 - 3071324 | 15392.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
