Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tryptophan 2,3-dioxygenase | DC425_13365 | Not Available | Positive | 2908952 - 2909734 | 29532.5 |
| tonb-dependent receptor | DC425_13370 | Not Available | Positive | 2909866 - 2911974 | 74813.8 |
| acyl-coa dehydrogenase | DC425_13375 | Not Available | Positive | 2912159 - 2913343 | 42750.3 |
| carnitine dehydratase | DC425_13380 | Not Available | Positive | 2913677 - 2914795 | 39344.2 |
| glucose/galactose mfs transporter | DC425_13385 | Not Available | Negative | 2914797 - 2916089 | 44809.6 |
| dioxygenase | DC425_13390 | Not Available | Negative | 2916189 - 2916989 | 28586.4 |
| isoquinoline 1-oxidoreductase | DC425_13395 | Not Available | Positive | 2917067 - 2917612 | 19189.2 |
| hypothetical protein | DC425_13400 | Not Available | Positive | 2917750 - 2918715 | 37626.4 |
| oxygenase | DC425_13405 | Not Available | Positive | 2918799 - 2919479 | 25425.8 |
| 2fe-2s ferredoxin | DC425_13420 | Not Available | Negative | 2920411 - 2920719 | 10872.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
