Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DC425_13065 | Not Available | Negative | 2849905 - 2850408 | 18762.8 |
| hypothetical protein | DC425_13070 | Not Available | Negative | 2850519 - 2850785 | 9482.29 |
| tryptophan-rich sensory protein | DC425_13075 | Not Available | Negative | 2850820 - 2851338 | 18518.3 |
| tlya family rrna (cytidine-2'-o)-methyltransferase | DC425_13080 | Not Available | Negative | 2851453 - 2852193 | 26153.4 |
| alpha/beta hydrolase | DC425_13085 | Not Available | Positive | 2852538 - 2853209 | 23851.0 |
| vapc toxin family pin domain ribonuclease | DC425_13090 | Not Available | Negative | 2853210 - 2853620 | 15230.3 |
| hypothetical protein | DC425_13095 | Not Available | Negative | 2853617 - 2853850 | 8607.15 |
| hypothetical protein | DC425_13100 | Not Available | Negative | 2853911 - 2854957 | 36247.2 |
| 1-deoxy-d-xylulose-5-phosphate synthase | DC425_13105 | Not Available | Negative | 2855123 - 2857048 | 68708.0 |
| transcriptional repressor | DC425_13110 | Not Available | Negative | 2857103 - 2857570 | 16791.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
