Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system protein gspg | DC425_12665 | Not Available | Negative | 2765584 - 2766024 | 15796.0 |
| type ii secretion system protein gspf | DC425_12670 | Not Available | Negative | 2766033 - 2767256 | 44169.5 |
| type ii secretion system protein gspe | DC425_12675 | Not Available | Negative | 2767352 - 2768944 | 56896.8 |
| type ii secretion system protein gspd | DC425_12680 | Not Available | Negative | 2769216 - 2771423 | 77124.7 |
| type ii secretory protein pulc | DC425_12685 | Not Available | Negative | 2771420 - 2772262 | 29112.2 |
| oxygenase | DC425_12690 | Not Available | Positive | 2772397 - 2773053 | 24056.5 |
| tonb-dependent receptor | DC425_12695 | Not Available | Negative | 2773212 - 2776052 | 102519.0 |
| hypothetical protein | DC425_12700 | Not Available | Negative | 2776156 - 2777799 | 55299.2 |
| hypothetical protein | DC425_12705 | Not Available | Negative | 2778203 - 2778538 | 11610.1 |
| Trna-val | Not Available | Not Available | Positive | 2778712 - 2778786 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
