Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | DC425_12105 | Not Available | Positive | 2653824 - 2655905 | 72199.0 |
| esterase | DC425_12110 | Not Available | Positive | 2656122 - 2657111 | 34818.6 |
| had family hydrolase | DC425_12115 | Not Available | Positive | 2657388 - 2659406 | 70221.1 |
| hypothetical protein | DC425_12120 | Not Available | Positive | 2659403 - 2660545 | 41048.8 |
| glycosyl transferase | DC425_12125 | Not Available | Positive | 2660542 - 2661468 | 33925.5 |
| glycosyltransferase family 4 protein | DC425_12130 | Not Available | Positive | 2661465 - 2662538 | 38962.2 |
| exopolysaccharide biosynthesis protein | DC425_12135 | Not Available | Positive | 2662535 - 2663425 | 32336.7 |
| glycosyl transferase | DC425_12140 | Not Available | Positive | 2663422 - 2664357 | 34023.2 |
| anhydro-n-acetylmuramic acid kinase | DC425_12145 | Not Available | Negative | 2664361 - 2665446 | 37133.9 |
| 30s ribosomal protein s12 methylthiotransferase rimo | DC425_12150 | Not Available | Positive | 2665585 - 2666910 | 48485.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
