Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-serine ammonia-lyase | DC425_12050 | Not Available | Negative | 2636130 - 2637491 | 48384.1 |
| sarcosine oxidase, gamma subunit | DC425_12055 | Not Available | Negative | 2637495 - 2637935 | 15812.0 |
| sarcosine oxidase subunit alpha | DC425_12060 | Not Available | Negative | 2638027 - 2641008 | 106316.0 |
| sarcosine oxidase subunit delta | DC425_12065 | Not Available | Negative | 2641005 - 2641289 | 10844.7 |
| sarcosine oxidase subunit beta | DC425_12070 | Not Available | Negative | 2641301 - 2642554 | 45139.1 |
| serine hydroxymethyltransferase | DC425_12075 | Not Available | Negative | 2642554 - 2643879 | 46914.0 |
| choline dehydrogenase | DC425_12080 | Not Available | Negative | 2644205 - 2645863 | 60614.0 |
| betaine-aldehyde dehydrogenase | DC425_12085 | Not Available | Negative | 2645874 - 2647886 | 71703.4 |
| amino acid permease | DC425_12090 | Not Available | Negative | 2648059 - 2649708 | 58649.7 |
| tonb-dependent receptor | DC425_12095 | Not Available | Positive | 2650826 - 2653150 | 84217.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
