Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna mismatch repair endonuclease mutl | DC425_11950 | Not Available | Negative | 2612857 - 2614683 | 64966.2 |
| rod shape-determining protein | DC425_11955 | Not Available | Positive | 2614816 - 2615856 | 36732.8 |
| rod shape-determining protein mrec | DC425_11960 | Not Available | Positive | 2615912 - 2616790 | 30628.3 |
| rod shape-determining protein mred | DC425_11965 | Not Available | Positive | 2616795 - 2617322 | 19163.1 |
| penicillin-binding protein 2 | DC425_11970 | Not Available | Positive | 2617319 - 2619424 | 75383.6 |
| rod shape-determining protein roda | DC425_11975 | Not Available | Positive | 2619421 - 2620530 | 39761.7 |
| Trna-lys | Not Available | Not Available | Positive | 2620648 - 2620723 | Not Available |
| s9 family peptidase | DC425_11985 | Not Available | Positive | 2620864 - 2623476 | 94154.8 |
| duf3253 domain-containing protein | DC425_11990 | Not Available | Negative | 2623531 - 2623773 | 8392.18 |
| aminodeoxychorismate lyase | DC425_11995 | Not Available | Positive | 2624418 - 2625107 | 23541.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
