Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3035 domain-containing protein | DC425_11140 | Not Available | Positive | 2434325 - 2434741 | 14032.5 |
| cystathionine beta-lyase | DC425_11145 | Not Available | Negative | 2435119 - 2436333 | 43333.5 |
| 3-mercaptopyruvate sulfurtransferase | DC425_11150 | Not Available | Negative | 2436323 - 2437186 | 30726.0 |
| cryptochrome/photolyase family protein | DC425_11155 | Not Available | Negative | 2437254 - 2438777 | 57899.4 |
| nadph-dependent 7-cyano-7-deazaguanine reductase quef | DC425_11160 | Not Available | Positive | 2438828 - 2439274 | 16504.7 |
| glycosyl transferase family 1 | DC425_11165 | Not Available | Positive | 2439398 - 2441674 | 83506.3 |
| glycosidase | DC425_11170 | Not Available | Positive | 2441728 - 2443008 | 47173.2 |
| oligopeptide transporter, opt family | DC425_11175 | Not Available | Negative | 2443474 - 2445453 | 66223.0 |
| homoserine dehydrogenase | DC425_11180 | Not Available | Positive | 2445593 - 2446888 | 44478.3 |
| hypothetical protein | DC425_11185 | Not Available | Positive | 2447196 - 2447402 | 6989.12 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
