Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydrofolate reductase | DC425_11090 | Not Available | Positive | 2424066 - 2424545 | 17245.5 |
| cobaltochelatase subunit cobs | DC425_11095 | Not Available | Positive | 2424670 - 2425674 | 37411.5 |
| type ii toxin-antitoxin system prevent-host-death family antitoxin | DC425_11100 | Not Available | Positive | 2425722 - 2426003 | 10414.5 |
| pin domain nuclease | DC425_11105 | Not Available | Positive | 2426003 - 2426389 | 14087.0 |
| cobaltochelatase subunit cobt | DC425_11110 | Not Available | Positive | 2426389 - 2428215 | 66704.1 |
| hypothetical protein | DC425_11115 | Not Available | Negative | 2428237 - 2428602 | 13066.7 |
| peptidase m19 | DC425_11120 | Not Available | Positive | 2428809 - 2430026 | 42911.0 |
| bifunctional riboflavin kinase/fmn adenylyltransferase | DC425_11125 | Not Available | Positive | 2430039 - 2430977 | 33206.6 |
| isoleucine--trna ligase | DC425_11130 | Not Available | Positive | 2431017 - 2433830 | 104445.0 |
| signal peptidase ii | DC425_11135 | Not Available | Positive | 2433823 - 2434332 | 18495.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
