Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding response regulator | DC425_10990 | Not Available | Positive | 2402243 - 2402908 | 24430.0 |
| histidine kinase | DC425_10995 | Not Available | Positive | 2402944 - 2404341 | 51515.7 |
| hpp family protein | DC425_11000 | Not Available | Positive | 2404532 - 2405209 | 22762.0 |
| alkane 1-monooxygenase | DC425_11005 | Not Available | Negative | 2405169 - 2406167 | 34829.4 |
| pyrimidine 5'-nucleotidase | DC425_11010 | Not Available | Positive | 2406287 - 2406952 | 24698.4 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | DC425_11015 | Not Available | Positive | 2406949 - 2407776 | 28577.1 |
| fructose-bisphosphatase class ii | DC425_11020 | Not Available | Positive | 2407987 - 2408949 | 33060.8 |
| peptidase m48 | DC425_11025 | Not Available | Positive | 2409295 - 2410668 | 49008.4 |
| disulfide bond formation protein dsba | DC425_11030 | Not Available | Positive | 2410665 - 2411378 | 25395.4 |
| ggdef domain-containing protein | DC425_11035 | Not Available | Positive | 2411419 - 2413134 | 62313.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
