Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polygalacturonase | DC425_10885 | Not Available | Negative | 2376011 - 2377276 | 43501.6 |
| gnat family n-acetyltransferase | DC425_10890 | Not Available | Negative | 2377281 - 2377841 | 20313.2 |
| signal peptide peptidase sppa | DC425_10895 | Not Available | Negative | 2377838 - 2379727 | 66001.3 |
| energy transducer tonb | DC425_10900 | Not Available | Negative | 2379813 - 2380604 | 27828.3 |
| energy transducer tonb | DC425_10905 | Not Available | Negative | 2380586 - 2381359 | 26874.2 |
| s9 family peptidase | DC425_10910 | Not Available | Positive | 2381509 - 2383527 | 71097.5 |
| tonb-dependent receptor | DC425_10915 | Not Available | Negative | 2383571 - 2385580 | 71446.5 |
| hypothetical protein | DC425_10920 | Not Available | Negative | 2385648 - 2386010 | 12460.2 |
| hypothetical protein | DC425_10925 | Not Available | Positive | 2386261 - 2387967 | 60683.9 |
| co-chaperone groes | DC425_10930 | Not Available | Positive | 2388145 - 2388432 | 10225.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
