Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phytoene desaturase | DC425_10785 | Not Available | Positive | 2358747 - 2360222 | 53820.3 |
| septal ring lytic transglycosylase rlpa family lipoprotein | DC425_10790 | Not Available | Positive | 2360468 - 2361028 | 19717.8 |
| tigr00730 family rossman fold protein | DC425_10795 | Not Available | Positive | 2361067 - 2361648 | 20478.8 |
| hypothetical protein | DC425_10800 | Not Available | Positive | 2361686 - 2362597 | 32841.1 |
| gnat family n-acetyltransferase | DC425_10805 | Not Available | Negative | 2362721 - 2363305 | 21889.7 |
| oxygen-dependent coproporphyrinogen oxidase | DC425_10810 | Not Available | Negative | 2363325 - 2364167 | 31085.4 |
| nudix hydrolase | DC425_10815 | Not Available | Negative | 2364219 - 2364638 | 15489.4 |
| rrna methyltransferase | DC425_10820 | Not Available | Negative | 2364641 - 2365102 | 16480.8 |
| ubiquinol-cytochrome c reductase iron-sulfur subunit | DC425_10825 | Not Available | Positive | 2365276 - 2365842 | 20163.2 |
| cytochrome b | DC425_10830 | Not Available | Positive | 2365859 - 2367145 | 47521.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
