Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-met | Not Available | Not Available | Positive | 626856 - 626931 | Not Available |
| hypothetical protein | DCP16_03055 | Not Available | Positive | 627064 - 628359 | 47764.6 |
| hypothetical protein | DCP16_03060 | Not Available | Positive | 628580 - 629869 | 48455.9 |
| hypothetical protein | DCP16_03065 | Not Available | Positive | 630147 - 630599 | 16979.4 |
| mannose-6-phosphate isomerase | DCP16_03070 | Not Available | Negative | 630764 - 632011 | 47368.6 |
| methionine synthase | DCP16_03075 | Not Available | Positive | 632200 - 635973 | 138504.0 |
| s-(hydroxymethyl)glutathione dehydrogenase/class iii alcohol dehydrogenase | DCP16_03080 | Not Available | Negative | 636276 - 637403 | 40007.4 |
| eama family transporter | DCP16_03085 | Not Available | Negative | 637492 - 638391 | 32928.8 |
| bifunctional udp-n-acetylglucosamine diphosphorylase/glucosamine-1-phosphate n-acetyltransferase glmu | DCP16_03090 | Not Available | Positive | 638634 - 639995 | 47870.2 |
| glutamine--fructose-6-phosphate transaminase (isomerizing) | DCP16_03095 | Not Available | Positive | 640159 - 641985 | 66193.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
